STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_09870Unannotated protein; Belongs to the trimethylamine methyltransferase family. (524 aa)    
Predicted Functional Partners:
A4R28_09875
Unannotated protein.
 
  
  0.910
A4R28_09885
Unannotated protein.
 
     0.781
A4R28_09920
Unannotated protein.
 
     0.781
A4R28_09900
Unannotated protein.
 
     0.780
A4R28_09915
Unannotated protein.
 
     0.767
GCA_000474725_03397
Unannotated protein.
 
     0.736
A4R28_09795
Unannotated protein.
  
     0.675
GCA_000474725_03399
Unannotated protein.
       0.549
A4R28_27750
Unannotated protein; Belongs to the trimethylamine methyltransferase family.
  
  
 
0.528
A4R28_09770
Unannotated protein; Belongs to the GcvT family.
 
     0.501
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.