STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_03851Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000474725_03017
Unannotated protein.
  
     0.746
GCA_000474725_03850
Unannotated protein.
 
     0.739
A4R28_21415
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.717
A4R28_16765
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.707
GCA_000474725_05907
Unannotated protein.
  
     0.707
GCA_000474725_04838
Unannotated protein.
  
     0.695
GCA_000474725_01043
Unannotated protein.
  
     0.691
A4R28_02640
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.676
A4R28_23210
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.671
GCA_000474725_00917
Unannotated protein.
  
     0.650
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.