STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_04796Unannotated protein. (273 aa)    
Predicted Functional Partners:
ndvA
Unannotated protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
     0.979
A4R28_06500
Unannotated protein.
   
  0.886
GCA_000474725_06206
Unannotated protein.
 
 
 0.877
GCA_000474725_06205
Unannotated protein.
   
 0.860
GCA_000474725_06207
Unannotated protein.
   
 0.860
GCA_000474725_04795
Unannotated protein.
       0.773
A4R28_31225
Unannotated protein.
   
 
  0.765
A4R28_03310
Unannotated protein.
    
  0.758
A4R28_03155
Unannotated protein.
 
  
 0.745
A4R28_03365
Unannotated protein.
 
  
  0.742
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.