Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4R28_17285 | A4R28_17580 | GCA_000474725_01961 | GCA_000474725_00690 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein. | 0.901 |
A4R28_17285 | A4R28_28830 | GCA_000474725_01961 | GCA_000474725_06632 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein. | 0.899 |
A4R28_17285 | gcvP | GCA_000474725_01961 | GCA_000474725_04161 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.942 |
A4R28_17285 | glyA | GCA_000474725_01961 | GCA_000474725_04389 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.922 |
A4R28_17285 | glyA-2 | GCA_000474725_01961 | GCA_000474725_05419 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.919 |
A4R28_17285 | kbl | GCA_000474725_01961 | GCA_000474725_04822 | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Unannotated protein; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.899 |
A4R28_17580 | A4R28_17285 | GCA_000474725_00690 | GCA_000474725_01961 | Unannotated protein. | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.901 |
A4R28_17580 | A4R28_28830 | GCA_000474725_00690 | GCA_000474725_06632 | Unannotated protein. | Unannotated protein. | 0.907 |
A4R28_17580 | GCA_000474725_05424 | GCA_000474725_00690 | GCA_000474725_05424 | Unannotated protein. | Unannotated protein. | 0.532 |
A4R28_17580 | GCA_000474725_06205 | GCA_000474725_00690 | GCA_000474725_06205 | Unannotated protein. | Unannotated protein. | 0.632 |
A4R28_17580 | gcvP | GCA_000474725_00690 | GCA_000474725_04161 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.995 |
A4R28_17580 | glyA | GCA_000474725_00690 | GCA_000474725_04389 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.945 |
A4R28_17580 | glyA-2 | GCA_000474725_00690 | GCA_000474725_05419 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.918 |
A4R28_17580 | kbl | GCA_000474725_00690 | GCA_000474725_04822 | Unannotated protein. | Unannotated protein; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.907 |
A4R28_17580 | tdh | GCA_000474725_00690 | GCA_000474725_04821 | Unannotated protein. | Unannotated protein; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.532 |
A4R28_28830 | A4R28_17285 | GCA_000474725_06632 | GCA_000474725_01961 | Unannotated protein. | Unannotated protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.899 |
A4R28_28830 | A4R28_17580 | GCA_000474725_06632 | GCA_000474725_00690 | Unannotated protein. | Unannotated protein. | 0.907 |
A4R28_28830 | GCA_000474725_05424 | GCA_000474725_06632 | GCA_000474725_05424 | Unannotated protein. | Unannotated protein. | 0.568 |
A4R28_28830 | GCA_000474725_06205 | GCA_000474725_06632 | GCA_000474725_06205 | Unannotated protein. | Unannotated protein. | 0.900 |
A4R28_28830 | bioD | GCA_000474725_06632 | GCA_000474725_05439 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.895 |
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