STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_03915Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_000474725_04924
Unannotated protein.
       0.773
A4R28_03910
Unannotated protein.
       0.773
A4R28_03905
Unannotated protein.
       0.773
GCA_000474725_02033
Unannotated protein.
  
     0.646
GCA_000474725_01612
Unannotated protein.
  
     0.599
ribB
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.554
A4R28_01795
Unannotated protein.
  
     0.510
GCA_000474725_03770
Unannotated protein.
  
     0.509
GCA_000474725_05965
Unannotated protein.
  
     0.483
A4R28_03900
Unannotated protein.
       0.474
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.