Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4R28_05190 | A4R28_17810 | GCA_000474725_04512 | GCA_000474725_00750 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein. | 0.864 |
A4R28_05190 | A4R28_21405 | GCA_000474725_04512 | GCA_000474725_05270 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.968 |
A4R28_05190 | A4R28_21410 | GCA_000474725_04512 | GCA_000474725_05269 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein. | 0.851 |
A4R28_05190 | A4R28_23325 | GCA_000474725_04512 | GCA_000474725_01750 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.859 |
A4R28_05190 | A4R28_23330 | GCA_000474725_04512 | GCA_000474725_01751 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.896 |
A4R28_05190 | A4R28_23340 | GCA_000474725_04512 | GCA_000474725_01753 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein. | 0.483 |
A4R28_05190 | fumC | GCA_000474725_04512 | GCA_000474725_04935 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.767 |
A4R28_05190 | gltA | GCA_000474725_04512 | GCA_000474725_03968 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Belongs to the citrate synthase family. | 0.864 |
A4R28_05190 | mdh | GCA_000474725_04512 | GCA_000474725_01786 | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.972 |
A4R28_17810 | A4R28_05190 | GCA_000474725_00750 | GCA_000474725_04512 | Unannotated protein. | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.864 |
A4R28_17810 | A4R28_21405 | GCA_000474725_00750 | GCA_000474725_05270 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.962 |
A4R28_17810 | A4R28_23325 | GCA_000474725_00750 | GCA_000474725_01750 | Unannotated protein. | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.936 |
A4R28_17810 | A4R28_23330 | GCA_000474725_00750 | GCA_000474725_01751 | Unannotated protein. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.928 |
A4R28_17810 | A4R28_23335 | GCA_000474725_00750 | GCA_000474725_01752 | Unannotated protein. | Unannotated protein. | 0.608 |
A4R28_17810 | A4R28_23340 | GCA_000474725_00750 | GCA_000474725_01753 | Unannotated protein. | Unannotated protein. | 0.774 |
A4R28_17810 | fumC | GCA_000474725_00750 | GCA_000474725_04935 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.851 |
A4R28_17810 | gltA | GCA_000474725_00750 | GCA_000474725_03968 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.572 |
A4R28_17810 | mdh | GCA_000474725_00750 | GCA_000474725_01786 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.977 |
A4R28_21405 | A4R28_05190 | GCA_000474725_05270 | GCA_000474725_04512 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.968 |
A4R28_21405 | A4R28_17810 | GCA_000474725_05270 | GCA_000474725_00750 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.962 |
page 1 of 6