Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4R28_01365 | A4R28_06165 | GCA_000474725_05746 | GCA_000474725_04159 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein. | 0.954 |
A4R28_01365 | A4R28_07020 | GCA_000474725_05746 | GCA_000474725_03997 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.445 |
A4R28_01365 | fhs | GCA_000474725_05746 | GCA_000474725_02114 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Belongs to the formate--tetrahydrofolate ligase family. | 0.908 |
A4R28_01365 | folD | GCA_000474725_05746 | GCA_000474725_00935 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.917 |
A4R28_01365 | folD-2 | GCA_000474725_05746 | GCA_000474725_01016 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.917 |
A4R28_01365 | gcvP | GCA_000474725_05746 | GCA_000474725_04161 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.998 |
A4R28_01365 | glyA-2 | GCA_000474725_05746 | GCA_000474725_05419 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.936 |
A4R28_01365 | purH | GCA_000474725_05746 | GCA_000474725_01593 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein. | 0.909 |
A4R28_01365 | purN | GCA_000474725_05746 | GCA_000474725_04981 | Unannotated protein; Belongs to the GcvT family. | Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.902 |
A4R28_06165 | A4R28_01365 | GCA_000474725_04159 | GCA_000474725_05746 | Unannotated protein. | Unannotated protein; Belongs to the GcvT family. | 0.954 |
A4R28_06165 | A4R28_07020 | GCA_000474725_04159 | GCA_000474725_03997 | Unannotated protein. | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.445 |
A4R28_06165 | fhs | GCA_000474725_04159 | GCA_000474725_02114 | Unannotated protein. | Unannotated protein; Belongs to the formate--tetrahydrofolate ligase family. | 0.908 |
A4R28_06165 | folD | GCA_000474725_04159 | GCA_000474725_00935 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.957 |
A4R28_06165 | folD-2 | GCA_000474725_04159 | GCA_000474725_01016 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.957 |
A4R28_06165 | gcvP | GCA_000474725_04159 | GCA_000474725_04161 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
A4R28_06165 | glyA-2 | GCA_000474725_04159 | GCA_000474725_05419 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.986 |
A4R28_06165 | purH | GCA_000474725_04159 | GCA_000474725_01593 | Unannotated protein. | Unannotated protein. | 0.909 |
A4R28_06165 | purN | GCA_000474725_04159 | GCA_000474725_04981 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.902 |
A4R28_07020 | A4R28_01365 | GCA_000474725_03997 | GCA_000474725_05746 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein; Belongs to the GcvT family. | 0.445 |
A4R28_07020 | A4R28_06165 | GCA_000474725_03997 | GCA_000474725_04159 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein. | 0.445 |
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