STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_05525Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000474725_05524
Unannotated protein.
 
  0.956
GCA_000474725_05526
Unannotated protein.
 
  0.956
GCA_000474725_05527
Unannotated protein.
 
  0.939
A4R28_18180
Unannotated protein.
  0.932
A4R28_17390
Unannotated protein.
 
  0.932
GCA_000474725_05334
Unannotated protein.
  
  0.915
A4R28_24870
Unannotated protein.
 
  0.913
A4R28_17380
Unannotated protein.
 
  0.897
A4R28_18190
Unannotated protein.
 
  0.889
A4R28_14090
Unannotated protein.
 
  0.882
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.