STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_05634Unannotated protein. (577 aa)    
Predicted Functional Partners:
GCA_000474725_02989
Unannotated protein.
   
 0.999
GCA_000474725_02867
Unannotated protein.
 
 
 0.983
GCA_000474725_04627
Unannotated protein.
   
 0.981
GCA_000474725_03747
Unannotated protein.
 
 0.973
GCA_000474725_03741
Unannotated protein.
 
 0.963
GCA_000474725_05532
Unannotated protein.
   
 0.959
GCA_000474725_02842
Unannotated protein.
 
 
 0.945
GCA_000474725_01884
Unannotated protein.
   
 0.932
alaS
Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.923
GCA_000474725_02338
Unannotated protein.
   
 0.922
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.