STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_00575Unannotated protein. (313 aa)    
Predicted Functional Partners:
A4R28_00560
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.986
A4R28_00565
Unannotated protein.
 
  0.955
GCA_000474725_02842
Unannotated protein.
   
 0.942
A4R28_06625
Unannotated protein.
   
 0.934
A4R28_28805
Unannotated protein.
   
 0.934
A4R28_18025
Unannotated protein.
   
 0.924
GCA_000474725_05712
Unannotated protein.
 
  0.921
A4R28_00570
Unannotated protein.
 
     0.897
GCA_000474725_05928
Unannotated protein.
 
  0.856
A4R28_12450
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.841
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.