STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_06219Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_000474725_06217
Unannotated protein.
 
 
 0.950
A4R28_30030
Unannotated protein.
 
     0.947
A4R28_30020
Unannotated protein.
 
     0.932
A4R28_30035
Unannotated protein.
 
     0.923
A4R28_30025
Unannotated protein.
 
     0.909
A4R28_30015
Unannotated protein.
 
 
  0.879
GCA_000474725_06216
Unannotated protein.
 
     0.854
GCA_000474725_06224
Unannotated protein.
 
     0.799
A4R28_30085
Unannotated protein.
 
     0.786
A4R28_30045
Unannotated protein.
       0.774
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.