STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_21970Unannotated protein. (344 aa)    
Predicted Functional Partners:
hisC-2
Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
    0.690
GCA_000474725_03925
Unannotated protein.
    
 0.571
GCA_000474725_02934
Unannotated protein.
 
  0.560
A4R28_12235
Unannotated protein.
    
  0.531
A4R28_27730
Unannotated protein.
   
 
  0.526
A4R28_01375
Unannotated protein.
  
  
 0.512
GCA_000474725_06576
Unannotated protein.
  
  0.503
A4R28_26370
Unannotated protein.
     
 0.445
GCA_000474725_04729
Unannotated protein.
     
 0.445
GCA_000474725_05580
Unannotated protein.
 
 
  0.436
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.