STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU34401.1DinB family protein; PFAM: DinB; KEGG: cpi:Cpin_2467 hypothetical protein. (177 aa)    
Predicted Functional Partners:
AEU34402.1
TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: aca:ACP_2315 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.
       0.533
AEU34403.1
PFAM: Protein of unknown function DUF2136; KEGG: rrs:RoseRS_0380 hypothetical protein.
       0.410
AEU34404.1
Transcriptional regulator, XRE family; KEGG: cyt:cce_3944 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
       0.410
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.