Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEU34410.1 | AEU34731.1 | AciX8_0050 | AciX8_0376 | PFAM: Peptidase M28; KEGG: aba:Acid345_1362 peptidase M28. | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | 0.427 |
AEU34731.1 | AEU34410.1 | AciX8_0376 | AciX8_0050 | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | PFAM: Peptidase M28; KEGG: aba:Acid345_1362 peptidase M28. | 0.427 |
AEU34731.1 | AEU34732.1 | AciX8_0376 | AciX8_0377 | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | KEGG: aba:Acid345_0247 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH). | 0.510 |
AEU34731.1 | cysN | AciX8_0376 | AciX8_1162 | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.590 |
AEU34732.1 | AEU34731.1 | AciX8_0377 | AciX8_0376 | KEGG: aba:Acid345_0247 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH). | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | 0.510 |
cysN | AEU34731.1 | AciX8_1162 | AciX8_0376 | Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2. | 0.590 |