Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEU34845.1 | AEU34846.1 | AciX8_0494 | AciX8_0495 | PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase. | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | 0.463 |
AEU34845.1 | AEU34847.1 | AciX8_0494 | AciX8_0496 | PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase. | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | 0.463 |
AEU34846.1 | AEU34845.1 | AciX8_0495 | AciX8_0494 | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase. | 0.463 |
AEU34846.1 | AEU34847.1 | AciX8_0495 | AciX8_0496 | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | 0.773 |
AEU34846.1 | AEU34848.1 | AciX8_0495 | AciX8_0497 | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.493 |
AEU34847.1 | AEU34845.1 | AciX8_0496 | AciX8_0494 | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase. | 0.463 |
AEU34847.1 | AEU34846.1 | AciX8_0496 | AciX8_0495 | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | 0.773 |
AEU34847.1 | AEU34848.1 | AciX8_0496 | AciX8_0497 | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.835 |
AEU34848.1 | AEU34846.1 | AciX8_0497 | AciX8_0495 | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Hypothetical protein; KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein. | 0.493 |
AEU34848.1 | AEU34847.1 | AciX8_0497 | AciX8_0496 | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. | 0.835 |