STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU35219.1PFAM: Major facilitator superfamily MFS-1; KEGG: mrb:Mrub_2943 major facilitator superfamily MFS_1. (432 aa)    
Predicted Functional Partners:
AEU35218.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mlo:mll5399 transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.565
AEU35220.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: rde:RD1_2419 ribokinase, putative.
  
  
 0.492
AEU35221.1
Transcriptional regulator, GntR family with UTRA sensor domain; KEGG: rcp:RCAP_rcp00006 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
  
  
 0.487
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.