STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU35458.1PFAM: Xylose isomerase, TIM barrel domain; KEGG: aca:ACP_0556 L-rhamnose isomerase. (397 aa)    
Predicted Functional Partners:
AEU35461.1
Rhamnulokinase; KEGG: aca:ACP_0559 rhamnulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal.
 
  
 0.959
AEU35460.1
KEGG: aca:ACP_0558 short chain dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Class II aldolase/adducin, N-terminal.
 
     0.818
AEU36619.1
KEGG: aca:ACP_0553 hypothetical protein.
 
     0.625
AEU35453.1
Protein of unknown function DUF718; PFAM: Rhamnose mutarotase; KEGG: hne:HNE_2132 hypothetical protein.
 
   
 0.623
AEU36344.1
PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; KEGG: sma:SAV_828 rhamnosidase.
 
     0.599
AEU36650.1
PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; KEGG: kfl:Kfla_2628 alpha-L-rhamnosidase.
  
     0.588
AEU35459.1
Regulatory protein IclR; PFAM: Transcription regulator IclR, N-terminal; Periplasmic binding protein/LacI transcriptional regulator; KEGG: aca:ACP_0557 putative sugar uptake ABC transporter, solute-binding protein.
 
     0.558
AEU35457.1
PFAM: RhaT l-rhamnose-proton symport 2; KEGG: sus:Acid_5934 rhamnose-proton symporter.
       0.499
AEU35468.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: sli:Slin_0049 oxidoreductase domain protein.
  
     0.428
AEU38807.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: aba:Acid345_1695 sugar phosphate isomerases/epimerases.
  
   
 0.410
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.