STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU36180.1KEGG: sbc:SbBS512_E0931 phage protein, HK97 GP10 family; TIGRFAM: Phage protein, HK97, gp10; PFAM: Protein of unknown function DUF646, phage head/tail component. (149 aa)    
Predicted Functional Partners:
AEU36181.1
Hypothetical protein; KEGG: eck:EC55989_0804 minor tail protein precursor H.
       0.773
AEU36182.1
KEGG: aba:Acid345_3159 hypothetical protein.
       0.645
AEU36183.1
KEGG: rce:RC1_0087 hypothetical protein.
       0.645
AEU36184.1
TIGRFAM: Intron endonuclease, group I; PFAM: Excinuclease ABC, C subunit, N-terminal; Intron-encoded nuclease 2; KEGG: pol:Bpro_1923 excinuclease ABC subunit C; SMART: Excinuclease ABC, C subunit, N-terminal; Intron-encoded nuclease 2.
       0.450
AEU36185.1
KEGG: aba:Acid345_3157 hypothetical protein.
       0.450
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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