STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU36186.1KEGG: aba:Acid345_3156 hypothetical protein. (930 aa)    
Predicted Functional Partners:
AEU36183.1
KEGG: rce:RC1_0087 hypothetical protein.
 
    0.937
AEU36181.1
Hypothetical protein; KEGG: eck:EC55989_0804 minor tail protein precursor H.
 
    0.931
AEU37439.1
Hypothetical protein; KEGG: sus:Acid_4657 Ig domain-containing protein.
 
     0.777
AEU37436.1
PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_3909 TonB-dependent receptor.
  
     0.770
AEU37801.1
KEGG: iag:Igag_0510 hypothetical protein.
  
     0.770
AEU38207.1
KEGG: aca:ACP_1574 IPT/TIG domain protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Cell surface receptor IPT/TIG.
 
     0.769
AEU38365.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: sus:Acid_0138 hypothetical protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family.
  
     0.768
AEU35463.1
KEGG: aca:ACP_0537 hypothetical protein.
  
     0.767
AEU36526.1
KEGG: bja:bll1305 hypothetical protein.
  
     0.765
AEU39057.1
KEGG: cja:CJA_0228 hypothetical protein.
 
     0.763
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.