STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU36581.1PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 39; KEGG: aba:Acid345_0427 cellulase precursor. (752 aa)    
Predicted Functional Partners:
AEU36313.1
PFAM: Protein of unknown function DUF1801; KEGG: aba:Acid345_4585 hypothetical protein.
  
     0.646
AEU35877.1
PFAM: Glycosyl transferase, family 2; Polysaccharide deacetylase; Glycoside hydrolase, family 18, catalytic domain; KEGG: aca:ACP_3012 polysaccharide deacetylase domain protein/glycosyl transferase, group 2 family protein.
 
     0.515
AEU36582.1
Transcriptional regulator, LacI family; KEGG: aca:ACP_1262 putative transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI.
       0.511
AEU35148.1
PFAM: Ion transport 2; KEGG: aca:ACP_1734 hypothetical protein.
  
     0.479
AEU36580.1
Xylanase; KEGG: xcb:XC_1120 xylanase.
       0.470
AEU34367.1
KEGG: sus:Acid_0160 hypothetical protein.
  
     0.464
AEU36699.1
KEGG: smd:Smed_6429 monophenol monooxygenase; PFAM: Tyrosinase.
  
     0.431
AEU37414.1
Sedolisin; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: cai:Caci_3376 peptidase S53 propeptide; SMART: Peptidase S53, propeptide.
  
     0.429
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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