STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU36610.1KEGG: sus:Acid_0867 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989. (222 aa)    
Predicted Functional Partners:
AEU36611.1
Urea carboxylase; SMART: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: sus:Acid_0866 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthetase, large subunit, ATP-binding.
 
   
 0.971
AEU36612.1
TIGRFAM: Allophanate hydrolase; KEGG: sus:Acid_0865 allophanate hydrolase; PFAM: Amidase.
 
   
 0.916
AEU36604.1
TIGRFAM: ABC transporter, urea utilisation-associated, substrate-binding protein; KEGG: sus:Acid_0864 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components.
 
   
 0.811
AEU36603.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sus:Acid_0863 binding-protein-dependent transport systems inner membrane component.
 
   
 0.807
AEU36609.1
KEGG: sus:Acid_0868 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989.
 
    
0.805
AEU36608.1
KEGG: sus:Acid_0856 hypothetical protein.
 
     0.564
AEU36602.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: sus:Acid_0862 ABC transporter related protein; SMART: ATPase, AAA+ type, core.
 
   
 0.428
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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