STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU36862.1PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6854 Cna B-type protein. (1171 aa)    
Predicted Functional Partners:
AEU38676.1
KEGG: aca:ACP_2139 TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
  
   0.781
AEU35055.1
KEGG: aba:Acid345_3525 Cna B-type protein.
  
     0.770
AEU35385.1
VWFA-related domain-containing protein; TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aba:Acid345_3993 von Willebrand factor, type A; SMART: von Willebrand factor, type A.
  
     0.769
AEU35553.1
PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: aba:Acid345_2141 hypothetical protein.
  
     0.769
AEU36462.1
KEGG: aca:ACP_2139 TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
  
   0.769
AEU35022.1
KEGG: aca:ACP_0810 hypothetical protein.
  
     0.763
AEU35165.1
KEGG: aca:ACP_1385 TonB family C-terminal domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
  
   0.763
AEU35749.1
VWFA-related domain-containing protein; TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aca:ACP_1008 von Willebrand factor type A domain protein; SMART: von Willebrand factor, type A.
  
     0.757
AEU38966.1
KEGG: aca:ACP_0488 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
  
   0.757
AEU37338.1
KEGG: aca:ACP_1367 hypothetical protein.
  
     0.755
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.