STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU37011.1PFAM: RhaT l-rhamnose-proton symport 2; KEGG: bth:BT_2953 rhamnose-proton symporter. (332 aa)    
Predicted Functional Partners:
AEU37010.1
KEGG: rca:Rcas_2117 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
       0.777
AEU37009.1
KEGG: rca:Rcas_2118 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
       0.773
AEU35230.1
PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; KEGG: ote:Oter_2278 glycoside hydrolase family protein.
 
     0.743
AEU38927.1
PFAM: Glycosyl hydrolase, family 88; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein.
  
     0.699
AEU37015.1
PFAM: Glycosyl hydrolase, family 88; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein.
  
     0.698
AEU36620.1
PFAM: Glycosyl hydrolase, family 88; Lipase, GDSL; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein.
  
     0.617
AEU35466.1
KEGG: sus:Acid_4530 hypothetical protein.
  
     0.592
AEU34409.1
KEGG: sus:Acid_4530 hypothetical protein.
  
     0.590
AEU37012.1
KEGG: hel:HELO_1505 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal.
       0.588
AEU37682.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bur:Bcep18194_B2718 major facilitator transporter.
  
    0.568
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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