STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU37178.1Protein of unknown function DUF796; PFAM: Virulence factor, secretion apparatus; KEGG: msl:Msil_2362 type VI secretion system effector, Hcp1 family. (163 aa)    
Predicted Functional Partners:
AEU37179.1
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: sus:Acid_0232 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
 
 0.982
AEU37180.1
Type VI secretion protein, VC_A0107 family; KEGG: sus:Acid_0231 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
 
 0.979
AEU37174.1
KEGG: sus:Acid_0237 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.951
AEU37175.1
KEGG: sus:Acid_0236 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25.
 
  
 0.951
AEU37173.1
Type VI secretion protein, VC_A0111 family; KEGG: sus:Acid_0238 hypothetical protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305.
 
  
 0.950
AEU37176.1
KEGG: sus:Acid_0235 ImpA domain-containing protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal.
 
  
 0.949
AEU37177.1
PFAM: virulence protein, SciE type; KEGG: sus:Acid_0234 virulence protein, SciE type.
 
  
 0.947
AEU37172.1
TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sus:Acid_0239 ATPase; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
 
  
 0.897
AEU37171.1
KEGG: gbm:Gbem_3035 type VI secretion system VgrG family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D.
 
  
 0.885
AEU37182.1
Type VI secretion protein, VC_A0114 family; KEGG: sus:Acid_0227 hypothetical protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876.
 
  
 0.843
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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