STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU37342.1Protein of unknown function UPF0175; PFAM: Uncharacterised protein family UPF0175; KEGG: mar:MAE_06970 hypothetical protein. (92 aa)    
Predicted Functional Partners:
AEU37343.1
KEGG: cyt:cce_2872 hypothetical protein.
 
     0.925
AEU35760.1
PFAM: Protein of unknown function DUF3368; KEGG: cyt:cce_3220 hypothetical protein.
 
     0.738
AEU34797.1
PFAM: Protein of unknown function DUF541; KEGG: npu:Npun_R1843 hypothetical protein.
  
     0.696
AEU36563.1
Glucosylceramidase; KEGG: aba:Acid345_1688 hypothetical protein.
  
     0.602
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
       0.580
AEU38423.1
KEGG: cyn:Cyan7425_2845 hypothetical protein.
  
     0.501
AEU38548.1
KEGG: sus:Acid_2590 TPR repeat-containing protein; manually curated; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4.
  
     0.498
AEU38145.1
PFAM: Membrane protein, 6-pyruvoyl-tetrahydropterin synthase-related domain; KEGG: aba:Acid345_2733 hypothetical protein.
  
     0.459
AEU37439.1
Hypothetical protein; KEGG: sus:Acid_4657 Ig domain-containing protein.
  
     0.404
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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