STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU37473.1KEGG: rba:RB11416 hypothetical protein. (355 aa)    
Predicted Functional Partners:
AEU37474.1
KEGG: rba:RB11415 hypothetical protein.
 
     0.951
AEU37475.1
Restriction modification system DNA specificity domain protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: app:CAP2UW1_0883 restriction endonuclease S subunits-like protein.
 
    0.948
AEU37477.1
PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Protein of unknown function DUF3559; Helicase, C-terminal; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: psl:Psta_4443 type III restriction protein res subunit; SMART: DEAD-like helicase, N-terminal.
 
     0.908
AEU37476.1
PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: psl:Psta_4442 N-6 DNA methylase.
 
   
 0.907
AEU37461.1
PFAM: Type IV secretion system, TraD, DNA-binding domain; KEGG: aca:ACP_1194 hypothetical protein.
   
 
 0.469
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.