STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU37841.1KEGG: sus:Acid_6175 hypothetical protein. (1407 aa)    
Predicted Functional Partners:
AEU37847.1
PFAM: Polysaccharide deacetylase; KEGG: tgr:Tgr7_2375 polysaccharide deacetylase.
 
     0.744
AEU37844.1
PFAM: O-antigen ligase-related; KEGG: gme:Gmet_2009 O-antigen polymerase.
       0.702
AEU37843.1
PFAM: Polysaccharide biosynthesis protein; KEGG: lch:Lcho_3073 polysaccharide biosynthesis protein.
       0.701
AEU37846.1
PFAM: Glycosyl transferase, family 2; KEGG: gme:Gmet_2008 glycosyl transferase family protein.
  
    0.698
AEU37842.1
PFAM: Protein of unknown function DUF2079, membrane; KEGG: hau:Haur_4272 membrane protein-like protein.
       0.697
AEU37845.1
PFAM: Glycosyl transferase, group 1; KEGG: gme:Gmet_2004 glycosyl transferase, group 1.
       0.697
AEU37840.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mxa:MXAN_1025 capsular exopolysaccharide family protein.
     
 0.628
AEU37837.1
PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: mxa:MXAN_3225 polysaccharide biosynthesis/export protein.
       0.608
AEU37838.1
Hypothetical protein; KEGG: bpm:BURPS1710b_A1170 adhesin/hemolysin.
       0.608
AEU37839.1
PFAM: Lipopolysaccharide biosynthesis; KEGG: dat:HRM2_19670 GumC1.
       0.608
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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