STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU38008.1KEGG: dak:DaAHT2_2586 HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, N-terminal; HipA-like, C-terminal. (413 aa)    
Predicted Functional Partners:
AEU35421.1
KEGG: cse:Cseg_2883 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 
 0.917
AEU35094.1
KEGG: aba:Acid345_1399 hypothetical protein.
  
 
 0.469
AEU36396.1
KEGG: aca:ACP_3299 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
 
 0.469
AEU36669.1
Helix-turn-helix domain protein; KEGG: bpy:Bphyt_4636 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
 
 0.469
AEU37467.1
KEGG: mac:MA0763 hypothetical protein.
  
 
 0.469
AEU38132.1
Helix-turn-helix domain protein; KEGG: aba:Acid345_1414 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
 
 0.469
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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