STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU38646.1KEGG: rmr:Rmar_1279 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type. (159 aa)    
Predicted Functional Partners:
AEU34447.1
Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: mrb:Mrub_1469 ferric uptake regulator, Fur family; Belongs to the Fur family.
 
  
 0.706
AEU38647.1
PFAM: Protein of unknown function DUF885; KEGG: aba:Acid345_0262 hypothetical protein.
       0.565
AEU38743.1
KEGG: ttm:Tthe_0253 Mn2+/Fe2+ transporter, NRAMP family; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein.
 
  
 0.548
AEU35189.1
PFAM: Zinc/iron permease; KEGG: sna:Snas_1529 zinc/iron permease.
  
  
 0.495
AEU37522.1
PFAM: Zinc/iron permease; KEGG: sna:Snas_1529 zinc/iron permease.
  
  
 0.495
AEU36043.1
PFAM: Cytochrome c assembly protein, transmembrane domain; Redoxin; KEGG: rme:Rmet_1170 cytochrome c biogenesis protein, transmembrane region.
  
  
 0.483
gyrA
DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
 
  
 0.479
AEU38939.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.476
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.466
AEU37113.1
PFAM: UspA; KEGG: dak:DaAHT2_0427 UspA domain protein.
 
  
 0.465
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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