STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU38710.1PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: sus:Acid_5819 peptidase U62, modulator of DNA gyrase. (624 aa)    
Predicted Functional Partners:
AEU38709.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: ank:AnaeK_1383 peptidase U62 modulator of DNA gyrase.
 
    
0.835
AEU38889.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: aba:Acid345_4760 microcin-processing peptidase 1.
  
     0.708
AEU38142.1
PFAM: Phosphoesterase, DHHA1; KEGG: aca:ACP_1660 hypothetical protein.
  
     0.500
AEU38711.1
PFAM: Peptidase M48; KEGG: aca:ACP_2851 peptidase, M48 family.
     
 0.453
AEU37523.1
KEGG: sus:Acid_1746 hypothetical protein.
  
     0.449
AEU34732.1
KEGG: aba:Acid345_0247 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH).
  
     0.436
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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