STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU38722.1KEGG: aba:Acid345_2824 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: Monooxygenase, FAD-binding. (399 aa)    
Predicted Functional Partners:
AEU38791.1
KEGG: aca:ACP_0764 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
 
 0.666
AEU37390.1
Magnesium chelatase; PFAM: ATPase, AAA-5; von Willebrand factor, type A; KEGG: cvi:CV_1570 chelatase protein; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core.
 
  
 0.616
AEU37389.1
TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: ddr:Deide_2p01670 putative cobaltochelatase, CobN subunit (hydrogenobyrinic acid a,c-diamide cobaltochelatase); PFAM: CobN/magnesium chelatase.
 
  
 0.494
AEU38226.1
PFAM: FAD dependent oxidoreductase; KEGG: scl:sce2184 putative electron transfer oxidoreductase.
  
     0.485
AEU37572.1
Long-chain-fatty-acid--CoA ligase., 6-deoxyerythronolide-B synthase; PFAM: AMP-dependent synthetase/ligase; Polyketide synthase, KR; Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Phosphopantetheine-binding; KEGG: bam:Bamb_6478 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
 
 0.440
AEU37566.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: rso:RS05860 peptide synthetase protein; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain.
  
  
 0.424
AEU37571.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase/Fatty acid synthase, KR; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase, acyl transferase domain; TIGRFAM: Amino acid adenylation; KEGG: bam:Bamb_6476 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Polyketide synthase, KR; Phosphopantetheine-binding; Acyl transferase; Condensation domain.
  
  
 0.424
AEU38790.1
KEGG: sus:Acid_5699 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
 
 0.415
AEU35257.1
KEGG: aba:Acid345_0874 radical SAM family Fe-S protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.401
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.