STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEU38803.1PFAM: Protein of unknown function DUF541; KEGG: aca:ACP_2597 hypothetical protein. (245 aa)    
Predicted Functional Partners:
AEU38802.1
KEGG: aca:ACP_2940 hypothetical protein.
       0.778
AEU38804.1
PFAM: Peptidase M50; KEGG: aca:ACP_2594 peptidase, M50B family.
       0.564
AEU34460.1
KEGG: hdn:Hden_2260 hypothetical protein.
  
     0.556
AEU38801.1
KEGG: aca:ACP_2938 hypothetical protein.
       0.521
AEU38075.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: aba:Acid345_4275 phage integrase; Belongs to the 'phage' integrase family.
  
     0.462
AEU39124.1
KEGG: aca:ACP_2369 hypothetical protein.
  
     0.434
AEU36116.1
KEGG: psp:PSPPH_0962 hypothetical protein.
  
     0.422
AEU38903.1
PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0561 hypothetical protein.
  
     0.410
Your Current Organism:
Granulicella mallensis
NCBI taxonomy Id: 682795
Other names: G. mallensis MP5ACTX8, Granulicella mallensis MP5ACTX8, Granulicella mallensis str. MP5ACTX8, Granulicella mallensis strain MP5ACTX8, Granulicella sp. MP5ACTX8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.