STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC33128.1Phosphate transport system substrate-binding protein; C414_000080098 identified by Glimmer3 with a raw score of 16.31. Gene function extrapolated from C8J_0575 (CP000814.1) after blastn alignment (95.03 percent identity over a 986 bp alignment). (331 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
 0.998
EFC33127.1
Phosphate ABC transporter, permease protein PstC, putative; Features C414_000080096, C414_000080097 joined to form C414_000080211 to correct 454 sequencing error (C414_000080096 identified by Glimmer3 with a raw score of 14.85, C414_000080097 identified by Glimmer3 with a raw score of 13.98). Gene function extrapolated from CJJ81176_0643 (CP000538.1) after blastn alignment (93.49 percent identity over a 891 bp alignment).
 
 
 0.998
EFC32214.1
Pyruvate ferredoxin/flavodoxin oxidoreductase; C414_000390037 identified by Glimmer3 with a raw score of 8.99. Gene function extrapolated from CJJ81176_1469 (CP000538.1) after blastn alignment (93.71 percent identity over a 3561 bp alignment).
     
 0.671
EFC33124.1
Hypothetical protein; C414_000080093 identified by Glimmer3 with a raw score of 8.28. Gene function extrapolated from CJJ81176_0647 (CP000538.1) after blastn alignment (90.96 percent identity over a 365 bp alignment) - for clarity, the original product name 'conserved hypothetical protein' has been renamed.
       0.582
EFC33125.1
Hypothetical protein; C414_000080094 identified by Glimmer3 with a raw score of 10.06. Gene function extrapolated from CJJ81176_0646 (CP000538.1) after blastn alignment (96.26 percent identity over a 107 bp alignment).
       0.582
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
 0.535
EFC32544.1
Putative thiamine-phosphate pyrophosphorylase; C414_000240004 identified by Glimmer3 with a raw score of 11.74. Gene function extrapolated from JJD26997_0738 (CP000768.1) after blastn alignment (88.32 percent identity over a 548 bp alignment).
   
    0.507
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
   
    0.507
EFC33129.1
Nonheme iron-containing ferritin; Iron-storage protein.
       0.502
EFC32419.1
Sensor histidine kinase; C414_000260097 identified by Glimmer3 with a raw score of 10.19. Gene function extrapolated from C8J_1206 (CP000814.1) after blastn alignment (91.47 percent identity over a 774 bp alignment).
  
  
 0.491
Your Current Organism:
Campylobacter jejuni 414
NCBI taxonomy Id: 683083
Other names: C. jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni str. 414, Campylobacter jejuni subsp. jejuni strain 414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.