STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC32153.1Hypothetical protein; C414_000420086 identified by Glimmer3 with a raw score of 9.27. Gene function extrapolated from CJJ81176_0376 (CP000538.1) after blastn alignment (94.37 percent identity over a 302 bp alignment) - for clarity, the original product name 'conserved domain protein' has been renamed. (261 aa)    
Predicted Functional Partners:
EFC31844.1
Putative flagellar motor switch protein; C414_000460028 identified by Glimmer3 with a raw score of 15.26. Gene function extrapolated from C8J_0052 (CP000814.1) after blastn alignment (91.70 percent identity over a 843 bp alignment).
  
  
 0.963
EFC32154.1
Flagellar switch protein FliN; C414_000420087 identified by Glimmer3 with a raw score of 16.03. Gene function extrapolated from CJJ81176_0375 (CP000538.1) after blastn alignment (94.82 percent identity over a 309 bp alignment).
  
  
 0.939
EFC33445.1
Flagellar hook protein; C414_000010029 identified by Glimmer3 with a raw score of 12.24. Gene function extrapolated from JJD26997_2103 (CP000768.1) after blastn alignment (92.85 percent identity over a 741 bp alignment).
  
  
 0.938
EFC32284.1
Possible flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.929
EFC31843.1
Flagellar motor switch protein; C414_000460027 identified by Glimmer3 with a raw score of 12.97. Gene function extrapolated from Cj0060c (AL111168.1) after blastn alignment (93.89 percent identity over a 1080 bp alignment).
  
 
 0.926
fliQ
Flagellar biosynthetic protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
  
 0.917
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.917
EFC32008.1
Flagellar motor switch protein; C414_000430003 identified by Glimmer3 with a raw score of 14.47. Gene function extrapolated from C8J_0296 (CP000814.1) after blastn alignment (92.52 percent identity over a 1029 bp alignment).
  
  
 0.917
flhB
Flagellar biosynthetic protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.916
EFC32329.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
  
  
 0.910
Your Current Organism:
Campylobacter jejuni 414
NCBI taxonomy Id: 683083
Other names: C. jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni str. 414, Campylobacter jejuni subsp. jejuni strain 414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.