STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC31943.1Homoserine dehydrogenase; C414_000450095 identified by Glimmer3 with a raw score of 15.89. Gene function extrapolated from C8J_0146 (CP000814.1) after blastn alignment (93.70 percent identity over a 254 bp alignment). (415 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 0.993
EFC32753.1
Threonine synthase; C414_000220003 identified by Glimmer3 with a raw score of 12.15. Gene function extrapolated from JJD26997_1198 (CP000768.1) after blastn alignment (93.22 percent identity over a 487 bp alignment).
 
 
 0.959
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.938
EFC32274.1
Putative cystathionine beta-lyase; C414_000350054 identified by Glimmer3 with a raw score of 12.97. Gene function extrapolated from Cj1392 (AL111168.1) after blastn alignment (97.50 percent identity over a 120 bp alignment).
  
 
 0.912
EFC32211.1
Transformation system protein; C414_000390034 identified by Glimmer3 with a raw score of 10.73. Gene function extrapolated from JJD26997_1820 (CP000768.1) after blastn alignment (94.86 percent identity over a 292 bp alignment).
     
  0.900
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
 0.883
EFC31942.1
Aminotransferase, classes I and II; C414_000450094 identified by Glimmer3 with a raw score of 13.27. Gene function extrapolated from C8J_0147 (CP000814.1) after blastn alignment (92.16 percent identity over a 1199 bp alignment).
  
 
 0.866
EFC33161.1
Aspartate kinase, monofunctional class; C414_000080136 identified by Glimmer3 with a raw score of 10.95. Gene function extrapolated from CJE0685 (CP000025.1) after blastn alignment (93.68 percent identity over a 1203 bp alignment); Belongs to the aspartokinase family.
 
 0.863
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 0.859
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.858
Your Current Organism:
Campylobacter jejuni 414
NCBI taxonomy Id: 683083
Other names: C. jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni 414, Campylobacter jejuni subsp. jejuni str. 414, Campylobacter jejuni subsp. jejuni strain 414
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.