Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI94420.1 | SHI94460.1 | SAMN05444337_1165 | SAMN05444337_1166 | Aspartyl protease. | TatD DNase family protein. | 0.591 |
SHI94420.1 | SHI94505.1 | SAMN05444337_1165 | SAMN05444337_1167 | Aspartyl protease. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.500 |
SHI94420.1 | SHI94549.1 | SAMN05444337_1165 | SAMN05444337_1168 | Aspartyl protease. | L-asparaginase. | 0.478 |
SHI94460.1 | SHI94420.1 | SAMN05444337_1166 | SAMN05444337_1165 | TatD DNase family protein. | Aspartyl protease. | 0.591 |
SHI94460.1 | SHI94505.1 | SAMN05444337_1166 | SAMN05444337_1167 | TatD DNase family protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.642 |
SHI94460.1 | SHI94549.1 | SAMN05444337_1166 | SAMN05444337_1168 | TatD DNase family protein. | L-asparaginase. | 0.717 |
SHI94460.1 | SHI94592.1 | SAMN05444337_1166 | SAMN05444337_1169 | TatD DNase family protein. | Biopolymer transport protein ExbB. | 0.408 |
SHI94460.1 | lepA | SAMN05444337_1166 | SAMN05444337_0708 | TatD DNase family protein. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.414 |
SHI94460.1 | metG | SAMN05444337_1166 | SAMN05444337_0797 | TatD DNase family protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.417 |
SHI94460.1 | rpsI | SAMN05444337_1166 | SAMN05444337_1287 | TatD DNase family protein. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.412 |
SHI94460.1 | secF | SAMN05444337_1166 | SAMN05444337_2068 | TatD DNase family protein. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.417 |
SHI94505.1 | SHI94420.1 | SAMN05444337_1167 | SAMN05444337_1165 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Aspartyl protease. | 0.500 |
SHI94505.1 | SHI94460.1 | SAMN05444337_1167 | SAMN05444337_1166 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | TatD DNase family protein. | 0.642 |
SHI94505.1 | SHI94549.1 | SAMN05444337_1167 | SAMN05444337_1168 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | L-asparaginase. | 0.799 |
SHI94505.1 | SHI94592.1 | SAMN05444337_1167 | SAMN05444337_1169 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Biopolymer transport protein ExbB. | 0.436 |
SHI94549.1 | SHI94420.1 | SAMN05444337_1168 | SAMN05444337_1165 | L-asparaginase. | Aspartyl protease. | 0.478 |
SHI94549.1 | SHI94460.1 | SAMN05444337_1168 | SAMN05444337_1166 | L-asparaginase. | TatD DNase family protein. | 0.717 |
SHI94549.1 | SHI94505.1 | SAMN05444337_1168 | SAMN05444337_1167 | L-asparaginase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.799 |
SHI94549.1 | SHI94592.1 | SAMN05444337_1168 | SAMN05444337_1169 | L-asparaginase. | Biopolymer transport protein ExbB. | 0.498 |
SHI94592.1 | SHI94460.1 | SAMN05444337_1169 | SAMN05444337_1166 | Biopolymer transport protein ExbB. | TatD DNase family protein. | 0.408 |
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