STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ03103.1Electron transfer flavoprotein beta subunit. (248 aa)    
Predicted Functional Partners:
SHJ03062.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
SHJ44840.1
Acyl-CoA dehydrogenase.
 
 
 0.968
SHJ75531.1
Acyl-CoA dehydrogenase.
 
 
 0.966
SHJ37368.1
Acyl-CoA dehydrogenase.
 
 
 0.963
SHI96479.1
glutaryl-CoA dehydrogenase.
 
 
 0.957
SHJ00195.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
   
 
  0.864
SHJ75451.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.864
SHJ56954.1
Glycolate oxidase.
 
 
 0.857
SHJ53832.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.849
SHJ44907.1
Glutamate synthase (NADPH/NADH) small chain.
  
 
 0.837
Your Current Organism:
Flavobacterium haoranii
NCBI taxonomy Id: 683124
Other names: ACCC 05409, DSM 22807, F. haoranii, Flavobacterium haoranii Zhang et al. 2010 emend. Sheu et al. 2013, Flavobacterium sp. LQY-7, KCTC 23008, strain LQY-7
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