STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ63968.1CubicO group peptidase, beta-lactamase class C family. (388 aa)    
Predicted Functional Partners:
SHJ63937.1
PH domain-containing protein.
  
    0.774
SHJ63896.1
Bleomycin hydrolase; Belongs to the peptidase C1 family.
       0.773
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.542
menB
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.499
Your Current Organism:
Flavobacterium haoranii
NCBI taxonomy Id: 683124
Other names: ACCC 05409, DSM 22807, F. haoranii, Flavobacterium haoranii Zhang et al. 2010 emend. Sheu et al. 2013, Flavobacterium sp. LQY-7, KCTC 23008, strain LQY-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.