Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI66040.1 | SHI97832.1 | SAMN05444337_0501 | SAMN05444337_1250 | Outer membrane translocation and assembly module TamA. | Por secretion system C-terminal sorting domain-containing protein. | 0.558 |
SHI66040.1 | SHJ44450.1 | SAMN05444337_0501 | SAMN05444337_2043 | Outer membrane translocation and assembly module TamA. | Peptidase family C25. | 0.770 |
SHI66040.1 | SHJ68579.1 | SAMN05444337_0501 | SAMN05444337_2444 | Outer membrane translocation and assembly module TamA. | Por secretion system C-terminal sorting domain-containing protein. | 0.536 |
SHI66040.1 | SHJ77125.1 | SAMN05444337_0501 | SAMN05444337_2586 | Outer membrane translocation and assembly module TamA. | Por secretion system C-terminal sorting domain-containing protein. | 0.574 |
SHI66040.1 | SHJ80577.1 | SAMN05444337_0501 | SAMN05444337_2653 | Outer membrane translocation and assembly module TamA. | Hypothetical protein. | 0.770 |
SHI85504.1 | SHJ77125.1 | SAMN05444337_0957 | SAMN05444337_2586 | Subtilase family protein; Belongs to the peptidase S8 family. | Por secretion system C-terminal sorting domain-containing protein. | 0.677 |
SHI96033.1 | SHJ77125.1 | SAMN05444337_1207 | SAMN05444337_2586 | Ferredoxin, 2Fe-2S. | Por secretion system C-terminal sorting domain-containing protein. | 0.590 |
SHI97832.1 | SHI66040.1 | SAMN05444337_1250 | SAMN05444337_0501 | Por secretion system C-terminal sorting domain-containing protein. | Outer membrane translocation and assembly module TamA. | 0.558 |
SHI97832.1 | SHJ44450.1 | SAMN05444337_1250 | SAMN05444337_2043 | Por secretion system C-terminal sorting domain-containing protein. | Peptidase family C25. | 0.680 |
SHI97832.1 | SHJ68579.1 | SAMN05444337_1250 | SAMN05444337_2444 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.472 |
SHI97832.1 | SHJ77125.1 | SAMN05444337_1250 | SAMN05444337_2586 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.648 |
SHI97832.1 | SHJ80577.1 | SAMN05444337_1250 | SAMN05444337_2653 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.639 |
SHJ24989.1 | SHJ77125.1 | SAMN05444337_1627 | SAMN05444337_2586 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.569 |
SHJ44450.1 | SHI66040.1 | SAMN05444337_2043 | SAMN05444337_0501 | Peptidase family C25. | Outer membrane translocation and assembly module TamA. | 0.770 |
SHJ44450.1 | SHI97832.1 | SAMN05444337_2043 | SAMN05444337_1250 | Peptidase family C25. | Por secretion system C-terminal sorting domain-containing protein. | 0.680 |
SHJ44450.1 | SHJ68579.1 | SAMN05444337_2043 | SAMN05444337_2444 | Peptidase family C25. | Por secretion system C-terminal sorting domain-containing protein. | 0.636 |
SHJ44450.1 | SHJ77125.1 | SAMN05444337_2043 | SAMN05444337_2586 | Peptidase family C25. | Por secretion system C-terminal sorting domain-containing protein. | 0.562 |
SHJ44450.1 | SHJ80577.1 | SAMN05444337_2043 | SAMN05444337_2653 | Peptidase family C25. | Hypothetical protein. | 0.777 |
SHJ68579.1 | SHI66040.1 | SAMN05444337_2444 | SAMN05444337_0501 | Por secretion system C-terminal sorting domain-containing protein. | Outer membrane translocation and assembly module TamA. | 0.536 |
SHJ68579.1 | SHI97832.1 | SAMN05444337_2444 | SAMN05444337_1250 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.472 |
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