STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lntApolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (543 aa)    
Predicted Functional Partners:
SFT12027.1
Short C-terminal domain-containing protein.
       0.840
SFT12058.1
Cysteine desulfurase.
       0.716
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.553
SFT12017.1
Putative endonuclease.
       0.551
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
   
 0.540
SFS30803.1
Hypothetical protein.
  
     0.429
SFS58735.1
Hypothetical protein.
  
     0.421
SFT01007.1
Beta-barrel assembly machine subunit BamD.
  
   
 0.417
SFS61237.1
Long-chain fatty acid transport protein.
  
     0.416
Your Current Organism:
Sphingobacterium wenxiniae
NCBI taxonomy Id: 683125
Other names: ACCC 05410, CCTCC AB 2010005, DSM 22789, KCTC 23009, S. wenxiniae, Sphingobacterium sp. LQY-18, Sphingobacterium wenxiniae Zhang et al. 2012, strain LQY-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.