STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_13304Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
TCAL_09993
Uncharacterized protein.
   
 0.986
TCAL_08584
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.977
TCAL_12750
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.958
TCAL_06388
Uncharacterized protein.
    
 0.894
TCAL_09248
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
    
 0.852
TCAL_00648
Uncharacterized protein.
   
 
 0.836
TCAL_00342
Uncharacterized protein; Belongs to the peptidase M16 family.
    
 0.785
TCAL_00463
J domain-containing protein.
   
 0.783
TCAL_13330
J domain-containing protein.
   
 0.783
TCAL_01662
Uncharacterized protein.
   
 0.766
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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