STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_17215HCO3_cotransp domain-containing protein. (785 aa)    
Predicted Functional Partners:
TCAL_06066
Uncharacterized protein.
    
 0.610
TCAL_08622
ANK_REP_REGION domain-containing protein.
    
 0.504
TCAL_10807
Uncharacterized protein; Belongs to the AAA ATPase family.
    
  0.491
TCAL_11311
Uncharacterized protein.
    
  0.490
TCAL_06432
Uncharacterized protein.
     
 0.438
TCAL_06295
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
     
 0.424
TCAL_08416
Uncharacterized protein.
    
  0.421
TCAL_11037
Uncharacterized protein.
    
  0.421
TCAL_08130
Rap-GAP domain-containing protein.
     
 0.417
TCAL_10276
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.416
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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