STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_08433Nuclear receptor domain-containing protein. (457 aa)    
Predicted Functional Partners:
TCAL_04391
Uncharacterized protein.
    
 0.569
TCAL_11573
Uncharacterized protein.
    
 0.569
TCAL_10011
BHLH domain-containing protein.
    
 0.569
TCAL_00984
Uncharacterized protein.
    
 0.569
TCAL_00948
Uncharacterized protein.
    
 0.569
TCAL_15661
PAS domain-containing protein.
    
 0.569
TCAL_02801
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.500
TCAL_05960
Ubiquitin-like domain-containing protein.
    
  0.456
TCAL_10666
Ubiquitin-like domain-containing protein.
    
  0.456
TCAL_01556
Ubiquitin-like domain-containing protein.
    
  0.456
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.