TCAL_04175 protein (Tigriopus californicus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

TCAL_04175

Uncharacterized protein. (186 aa)

Predicted Functional Partners:

TCAL_06667

0.999

TCAL_03319

0.999

TCAL_05883

0.999

TCAL_03217

0.999

TCAL_16413

0.999

TCAL_00971

0.999

TCAL_11611

0.999

TCAL_07371

0.999

CYC1

0.999

TCAL_03710

0.999

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYC1	TCAL_00971	Q6VBC0	A0A553P7T2	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	TCAL_03217	Q6VBC0	A0A553NTV3	Cytochrome c1.	Uncharacterized protein.	0.998
CYC1	TCAL_03319	Q6VBC0	A0A553NNL5	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	TCAL_03710	Q6VBC0	Q6VBC4	Cytochrome c1.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CYC1	TCAL_04175	Q6VBC0	A0A553N837	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	TCAL_05883	Q6VBC0	A0A553NQ23	Cytochrome c1.	Uncharacterized protein.	0.990
CYC1	TCAL_06667	Q6VBC0	A0A553N7S9	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	TCAL_07371	Q6VBC0	A0A553PNC9	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	TCAL_11611	Q6VBC0	A0A553PBA4	Cytochrome c1.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.999
CYC1	TCAL_16413	Q6VBC0	A0A553P068	Cytochrome c1.	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	0.998
TCAL_00971	CYC1	A0A553P7T2	Q6VBC0	Uncharacterized protein.	Cytochrome c1.	0.999
TCAL_00971	TCAL_03217	A0A553P7T2	A0A553NTV3	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00971	TCAL_03319	A0A553P7T2	A0A553NNL5	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00971	TCAL_03710	A0A553P7T2	Q6VBC4	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
TCAL_00971	TCAL_04175	A0A553P7T2	A0A553N837	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00971	TCAL_05883	A0A553P7T2	A0A553NQ23	Uncharacterized protein.	Uncharacterized protein.	0.995
TCAL_00971	TCAL_06667	A0A553P7T2	A0A553N7S9	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00971	TCAL_07371	A0A553P7T2	A0A553PNC9	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00971	TCAL_11611	A0A553P7T2	A0A553PBA4	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.999
TCAL_00971	TCAL_16413	A0A553P7T2	A0A553P068	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	0.999