STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_10558Ribosomal_L18e/L15P domain-containing protein. (291 aa)    
Predicted Functional Partners:
TCAL_09825
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
TCAL_15077
Uncharacterized protein.
  
 0.994
TCAL_04899
Ribosomal_L18_c domain-containing protein.
  
 0.991
TCAL_12030
Uncharacterized protein.
  
 0.991
TCAL_06937
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.990
TCAL_06142
Uncharacterized protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.990
TCAL_03921
Uncharacterized protein.
  
 0.989
TCAL_04911
Uncharacterized protein.
  
 0.989
TCAL_05591
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.989
TCAL_11766
Uncharacterized protein.
  
 
 0.989
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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