STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_16327Importin N-terminal domain-containing protein. (898 aa)    
Predicted Functional Partners:
TCAL_11602
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.966
TCAL_00935
Importin N-terminal domain-containing protein.
   
 
 0.879
TCAL_00403
Uncharacterized protein.
    
   0.860
TCAL_00355
PUA domain-containing protein.
    
 
 0.860
TCAL_09113
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.860
TCAL_05590
Peptidase S59 domain-containing protein.
   
 0.858
TCAL_00114
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.852
TCAL_11439
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.851
TCAL_04980
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.851
TCAL_10600
Tap-RNA_bind domain-containing protein.
    
 
 0.814
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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