STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_11325Protein kinase domain-containing protein. (445 aa)    
Predicted Functional Partners:
TCAL_07962
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.846
TCAL_12094
ABC1 domain-containing protein.
  
 
 
 0.740
TCAL_06389
Uncharacterized protein.
   
    0.676
TCAL_09932
Uncharacterized protein.
   
    0.648
TCAL_08370
Uncharacterized protein.
    
 0.566
TCAL_01480
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
    
 0.562
TCAL_04300
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
    0.558
TCAL_10348
Uncharacterized protein.
  
 
  0.554
TCAL_01175
Uncharacterized protein.
    
 
 0.518
TCAL_08693
Glyco_trans_4-like_N domain-containing protein.
   
 
  0.483
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.