TCAL_16301 protein (Tigriopus californicus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

TCAL_16301

Uncharacterized protein. (194 aa)

Predicted Functional Partners:

TCAL_09825

0.783

TCAL_13566

0.634

TCAL_02003

0.634

TCAL_01951

0.594

TCAL_06351

0.564

TCAL_01662

0.542

TCAL_00865

0.541

TCAL_07415

0.518

TCAL_11193

0.517

TCAL_12872

0.513

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00865	TCAL_01951	A0A553NAT1	A0A553P6A3	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_00865	TCAL_06351	A0A553NAT1	A0A553PAA4	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.999
TCAL_00865	TCAL_09825	A0A553NAT1	A0A553PNW5	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
TCAL_00865	TCAL_11193	A0A553NAT1	A0A553PPI4	Uncharacterized protein.	Uncharacterized protein.	0.504
TCAL_00865	TCAL_16301	A0A553NAT1	A0A553N9K8	Uncharacterized protein.	Uncharacterized protein.	0.541
TCAL_01662	TCAL_16301	A0A553P9Z1	A0A553N9K8	Uncharacterized protein.	Uncharacterized protein.	0.542
TCAL_01951	TCAL_00865	A0A553P6A3	A0A553NAT1	Uncharacterized protein.	Uncharacterized protein.	0.999
TCAL_01951	TCAL_06351	A0A553P6A3	A0A553PAA4	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.999
TCAL_01951	TCAL_09825	A0A553P6A3	A0A553PNW5	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
TCAL_01951	TCAL_16301	A0A553P6A3	A0A553N9K8	Uncharacterized protein.	Uncharacterized protein.	0.594
TCAL_02003	TCAL_06351	A0A553PNQ4	A0A553PAA4	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.992
TCAL_02003	TCAL_07415	A0A553PNQ4	A0A553PGI5	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.997
TCAL_02003	TCAL_09825	A0A553PNQ4	A0A553PNW5	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.808
TCAL_02003	TCAL_11193	A0A553PNQ4	A0A553PPI4	Uncharacterized protein.	Uncharacterized protein.	0.552
TCAL_02003	TCAL_12872	A0A553PNQ4	A0A553P2J3	Uncharacterized protein.	MPN domain-containing protein.	0.765
TCAL_02003	TCAL_13566	A0A553PNQ4	A0A553PES7	Uncharacterized protein.	Phospholipase A2.	0.564
TCAL_02003	TCAL_16301	A0A553PNQ4	A0A553N9K8	Uncharacterized protein.	Uncharacterized protein.	0.634
TCAL_06351	TCAL_00865	A0A553PAA4	A0A553NAT1	Ribosomal_S27 domain-containing protein.	Uncharacterized protein.	0.999
TCAL_06351	TCAL_01951	A0A553PAA4	A0A553P6A3	Ribosomal_S27 domain-containing protein.	Uncharacterized protein.	0.999
TCAL_06351	TCAL_02003	A0A553PAA4	A0A553PNQ4	Ribosomal_S27 domain-containing protein.	Uncharacterized protein.	0.992