STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_04659Uncharacterized protein. (628 aa)    
Predicted Functional Partners:
TCAL_06431
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.941
TCAL_15633
SCP2 domain-containing protein.
  
 0.929
TCAL_11585
Uncharacterized protein.
    
 0.919
TCAL_13113
Uncharacterized protein.
    
 0.919
TCAL_02178
Uncharacterized protein.
    
 0.919
TCAL_10306
Uncharacterized protein.
    
 0.919
TCAL_03934
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.919
TCAL_15672
Uncharacterized protein.
    
 0.919
TCAL_00818
Histone domain-containing protein.
   
 0.885
TCAL_03596
Histone domain-containing protein.
   
 0.885
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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