STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_03637Uncharacterized protein. (211 aa)    
Predicted Functional Partners:
TCAL_00661
Uncharacterized protein.
    
  0.953
TCAL_00423
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.950
TCAL_00691
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.950
TCAL_05911
Uncharacterized protein.
  
  
 
0.901
TCAL_10350
Uncharacterized protein.
    
 0.868
TCAL_08466
Uncharacterized protein.
    
 0.864
TCAL_02176
Uncharacterized protein.
    
 0.864
TCAL_09608
Uncharacterized protein.
    
 0.790
TCAL_05624
Uncharacterized protein.
   
 0.787
TCAL_16553
C2H2-type domain-containing protein.
    
 0.762
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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